SchizoLift

genome coordinate conversion for Schizosaccharomyces species Documentation
A→B: not loaded
B→A: not loaded

Input coordinates (one per line, CHR:POS or CHR:START-END; coordinates are 1-based and inclusive)

Results

Explanation of the output: A = source genome; B = target genome Status: OK = Interval maps within a single block SPANNING_BLOCKS = Interval spans multiple blocks; see “gaps” column for details on gaps between blocks UNMAPPED = One or both endpoints do not fall in any block Round‑Trip: PASS = B→A interval equals original; otherwise FAIL Gaps syntax: GAP_A:N@A:start→end = N bp unaligned bases on A GAP_B:N@B:start→end = N bp unaligned bases on B OVERLAP_B:N@B:start→end = N bp overlap on B across block boundary Round‑Trip columns “gapsAB” and “gapsBA” list gaps seen in each direction